Cpa|evm.model.tig00021318.23

Description : RNA processing.RNA 5-end cap adding.mRNA capping enzyme

Gene families : OG0003639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003639_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021318.23

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os12g09120.1	LOC_Os12g09120	mRNA capping enzyme	0.01	OrthoFinder output from all 47 species
Solyc09g011930.3.1	Solyc09g011930	mRNA capping enzyme	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004484	mRNA guanylyltransferase activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006370	7-methylguanosine mRNA capping	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008192	RNA guanylyltransferase activity	None	Extended
BP	GO:0009452	7-methylguanosine RNA capping	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0036260	RNA capping	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0070568	guanylyltransferase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000439	transcription factor TFIIH core complex	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006289	nucleotide-excision repair	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008318	protein prenyltransferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0018342	protein prenylation	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
BP	GO:0097354	prenylation	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001339	mRNA_cap_enzyme_adenylation	19	200
IPR013846	mRNA_cap_enzyme_C	204	334

External Links

No external refs found!

Cpa|evm.model.tig00021318.23

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation