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  5. Cpa|evm.model.tig00021312.50

Cpa|evm.model.tig00021312.50 (ATSRL1)


Aliases : ATSRL1

Description : Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana


Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021312.50
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00170p00050330 evm_27.TU.AmTr_v1... Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Adi_g060960 ATSRL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g05835 ATSRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02827 ATSRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_176964g0010 ATSRL1 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MpVg00250.1 ATSRL1 No annotation 0.01 OrthoFinder output from all 47 species
Pir_g20398 ATSRL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g38592 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g19184 ATSRL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR005037 PRP38 19 177
No external refs found!