Cpa|evm.model.tig00021254.24

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP54 component

Gene families : OG0003514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003514_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021254.24

Target	Alias	Description	ECC score	Gene Family Method
Aob_g08410	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.01	OrthoFinder output from all 47 species
Aop_g04972	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Dcu_g01603	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Dde_g05307	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Gb_39090	No alias	component SRP54 of SRP (signal recognition particle) complex	0.01	OrthoFinder output from all 47 species
Lfl_g04723	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
MA_10429875g0010	No alias	component SRP54 of SRP (signal recognition particle) complex	0.01	OrthoFinder output from all 47 species
Mp1g19000.1	No alias	component SRP54 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species
Smo158663	No alias	Protein translocation.endoplasmic...	0.02	OrthoFinder output from all 47 species
Solyc03g116810.4.1	Solyc03g116810	component SRP54 of SRP (signal recognition particle) complex	0.03	OrthoFinder output from all 47 species
Solyc12g042740.2.1	Solyc12g042740	component SRP54 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species
Spa_g11832	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Tin_g06573	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Zm00001e019665_P002	Zm00001e019665	component SRP54 of SRP (signal recognition particle) complex	0.01	OrthoFinder output from all 47 species
Zm00001e028974_P003	Zm00001e028974	component SRP54 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004125	Signal_recog_particle_SRP54_M	330	416
IPR013822	Signal_recog_particl_SRP54_hlx	6	69
IPR000897	SRP54_GTPase_dom	92	214
IPR000897	SRP54_GTPase_dom	228	299

External Links

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Cpa|evm.model.tig00021254.24

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation