Cpa|evm.model.tig00021017.29 (RFC1, AtRFC1)

Aliases : RFC1, AtRFC1

Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC1 component

Gene families : OG0004063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004063_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021017.29
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
Ceric.22G002100.1	RFC1, AtRFC1,...	component *(RFC1) of PCNA sliding clamp loader complex &...	0.03	OrthoFinder output from all 47 species
Cre12.g521200	RFC1, AtRFC1	Cell cycle.interphase.DNA...	0.02	OrthoFinder output from all 47 species
LOC_Os11g36390.1	RFC1, AtRFC1,...	component RFC1 of PCNA sliding clamp loader complex	0.01	OrthoFinder output from all 47 species
Mp8g17270.1	RFC1, AtRFC1	component RFC1 of PCNA sliding clamp loader complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013725	DNA_replication_fac_RFC1_C	847	1009
IPR003959	ATPase_AAA_core	588	674

External Links

No external refs found!