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  5. Cpa|evm.model.tig00020943.41

Cpa|evm.model.tig00020943.41


Description : Cell cycle.interphase.DNA replication.maturation.ribonuclease H2 complex.subunit A


Gene families : OG0006146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020943.41
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Aev_g47868 No alias subunit A of ribonuclease H2 complex & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g12195 No alias subunit A of ribonuclease H2 complex & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0015.g014211 No alias subunit A of ribonuclease H2 complex & original... 0.01 OrthoFinder output from all 47 species
Ceric.20G086300.1 Ceric.20G086300 subunit A of ribonuclease H2 complex & original... 0.02 OrthoFinder output from all 47 species
Cre17.g701350 No alias Cell cycle.interphase.DNA... 0.07 OrthoFinder output from all 47 species
Dcu_g15385 No alias subunit A of ribonuclease H2 complex & original description: none 0.01 OrthoFinder output from all 47 species
Gb_25234 No alias subunit A of ribonuclease H2 complex 0.04 OrthoFinder output from all 47 species
MA_1140949g0010 No alias subunit A of ribonuclease H2 complex 0.02 OrthoFinder output from all 47 species
MA_60023g0010 No alias subunit A of ribonuclease H2 complex 0.01 OrthoFinder output from all 47 species
MA_864870g0010 No alias subunit A of ribonuclease H2 complex 0.02 OrthoFinder output from all 47 species
Msp_g02717 No alias subunit A of ribonuclease H2 complex & original description: none 0.01 OrthoFinder output from all 47 species
Smo439531 No alias Cell cycle.interphase.DNA... 0.01 OrthoFinder output from all 47 species
Solyc11g006860.2.1 Solyc11g006860 subunit A of ribonuclease H2 complex 0.01 OrthoFinder output from all 47 species
Tin_g00460 No alias subunit A of ribonuclease H2 complex & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024567 RNase_HII/HIII_dom 1 212
No external refs found!