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  5. Cpa|evm.model.tig00020904.68

Cpa|evm.model.tig00020904.68 (CLO, GFA1, MEE5)


Aliases : CLO, GFA1, MEE5

Description : 110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Arabidopsis thaliana


Gene families : OG0005717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020904.68

Target Alias Description ECC score Gene Family Method Actions
Als_g01183 CLO, GFA1, MEE5 component *(CLO/SNU114/MAC11) of MAC... 0.03 OrthoFinder output from all 47 species
Ceric.11G055700.1 CLO, GFA1, MEE5,... component *(CLO/SNU114/MAC11) of MAC... 0.02 OrthoFinder output from all 47 species
Cre17.g737250 CLO, GFA1, MEE5 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Dac_g05149 CLO, GFA1, MEE5 component *(CLO/SNU114/MAC11) of MAC... 0.02 OrthoFinder output from all 47 species
Gb_08962 CLO, GFA1, MEE5 protein factor SNU114/U5-116kDa of U5 small nuclear... 0.02 OrthoFinder output from all 47 species
LOC_Os06g40600.1 CLO, GFA1, MEE5,... protein factor SNU114/U5-116kDa of U5 small nuclear... 0.02 OrthoFinder output from all 47 species
Pnu_g08542 CLO, GFA1, MEE5 component *(CLO/SNU114/MAC11) of MAC... 0.02 OrthoFinder output from all 47 species
Solyc07g007210.3.1 CLO, GFA1, MEE5,... protein factor SNU114/U5-116kDa of U5 small nuclear... 0.01 OrthoFinder output from all 47 species
Spa_g01974 CLO, GFA1, MEE5 component *(CLO/SNU114/MAC11) of MAC... 0.01 OrthoFinder output from all 47 species
Zm00001e037442_P001 CLO, GFA1, MEE5,... protein factor SNU114/U5-116kDa of U5 small nuclear... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 440 577
IPR000640 EFG_V-like 1 87
No external refs found!