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  5. Cpa|evm.model.tig00020878.26

Cpa|evm.model.tig00020878.26 (PUM7, APUM7)


Aliases : PUM7, APUM7

Description : Pumilio homolog 12 OS=Arabidopsis thaliana


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020878.26

Target Alias Description ECC score Gene Family Method Actions
Als_g63300 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23704.t1 APUM12, PUM12,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene23705.t1 APUM12, PUM12,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene72050.t1 APUM12, PUM12,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.01 OrthoFinder output from all 47 species
Azfi_s0255.g060478 PUM7, APUM7 not classified & original description: CDS=1-1518 0.02 OrthoFinder output from all 47 species
Cre12.g544700 PUM7, APUM7 Pumilio homolog 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009020001 PUM7, APUM7 Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g13938 PUM7, APUM7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002092 APUM12, PUM12 not classified & original description: CDS=226-2811 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016995 APUM12, PUM12 not classified & original description: CDS=243-2819 0.01 OrthoFinder output from all 47 species
Tin_g06123 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039541_P001 APUM12, PUM12,... Pumilio homolog 12 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 644 672
IPR001313 Pumilio_RNA-bd_rpt 536 568
IPR001313 Pumilio_RNA-bd_rpt 501 532
IPR001313 Pumilio_RNA-bd_rpt 572 604
IPR001313 Pumilio_RNA-bd_rpt 609 640
IPR001313 Pumilio_RNA-bd_rpt 461 486
IPR000571 Znf_CCCH 335 352
No external refs found!