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  5. Cpa|evm.model.tig00020849.2

Cpa|evm.model.tig00020849.2 (ORF158)


Aliases : ORF158

Description : Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020849.2
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.96 No alias No description available 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000448.80 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000607.5 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000658.17 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000658.19 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.52 ORF158 No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001182.3 No alias No description available 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001182.4 No alias RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.15 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.48 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.18 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.119 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.28 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.30 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021608.9 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.03 OrthoFinder output from all 47 species
Dac_g07358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06310 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g08622 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g11825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 3123 3230
IPR000477 RT_dom 2225 2384
No external refs found!