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  5. Cpa|evm.model.tig00020734.44

Cpa|evm.model.tig00020734.44 (ATHMG, HMG, SSRP1, NFD)


Aliases : ATHMG, HMG, SSRP1, NFD

No description available


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020734.44
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cba_g26338 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Tin_g21165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR032837 G1PDH 17 135
IPR009071 HMG_box_dom 434 488
IPR009071 HMG_box_dom 534 597
No external refs found!