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  5. Cpa|evm.model.tig00020710.65

Cpa|evm.model.tig00020710.65 (ATRER1C1)


Aliases : ATRER1C1

Description : Protein RER1C OS=Arabidopsis thaliana


Gene families : OG0001450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020710.65
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Adi_g035506 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.01 OrthoFinder output from all 47 species
Adi_g053700 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.01 OrthoFinder output from all 47 species
Adi_g053701 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Als_g36499 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G084800.1 ATRER1A, Ceric.23G084800 membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Cre12.g555350 ATRER1A Protein RER1C OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g11965 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07398 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15513 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.04 OrthoFinder output from all 47 species
Gb_36238 RER1B, ATRER1B Protein RER1B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g01640.1 ATRER1A, LOC_Os01g01640 Protein RER1A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g49460.1 ATRER1A, LOC_Os06g49460 Protein RER1A OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os08g21760.1 ATRER1A, LOC_Os08g21760 Protein RER1A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g22303 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Mp2g00750.1 ATRER1A Protein RER1A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g22307 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.01 OrthoFinder output from all 47 species
Ppi_g13874 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Smo438307 ATRER1A Protein RER1A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g093010.3.1 ATRER1A, Solyc02g093010 Protein RER1A OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g13546 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR004932 Rer1 196 353
No external refs found!