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  5. Cpa|evm.model.tig00020684.34

Cpa|evm.model.tig00020684.34


Description : Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.SPC25 component


Gene families : OG0005248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020684.34
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00055420 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
AT3G48210 No alias CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,... 0.03 OrthoFinder output from all 47 species
Adi_g001885 No alias component *(SPC25) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Cre16.g658600 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
GSVIVT01007687001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
Gb_11408 No alias component SPC25 of NDC80 outer kinetochore complex 0.04 OrthoFinder output from all 47 species
LOC_Os01g74170.1 LOC_Os01g74170 component SPC25 of NDC80 outer kinetochore complex 0.01 OrthoFinder output from all 47 species
MA_33743g0010 No alias component SPC25 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
Mp1g01260.1 No alias component SPC25 of NDC80 outer kinetochore complex 0.03 OrthoFinder output from all 47 species
Nbi_g03360 No alias component *(SPC25) of NDC80 outer kinetochore complex &... 0.01 OrthoFinder output from all 47 species
Solyc03g112550.3.1 Solyc03g112550 component SPC25 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
Zm00001e028256_P002 Zm00001e028256 component SPC25 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030991 intraciliary transport particle A IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034453 microtubule anchoring IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR013255 Spc25_C 155 223
No external refs found!