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  5. Cpa|evm.model.tig00020614.99

Cpa|evm.model.tig00020614.99 (QQT2)


Aliases : QQT2

Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor


Gene families : OG0005811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020614.99

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034965001 QQT2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g19870.1 QQT2, LOC_Os03g19870 GPN1 RNA polymerase-II nuclear import factor 0.02 OrthoFinder output from all 47 species
MA_102653g0010 QQT2 GPN-loop GTPase QQT2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_117463g0010 QQT2 GPN-loop GTPase QQT2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ore_g45208 QQT2 RNA polymerase-II nuclear import factor *(GPN1) &... 0.01 OrthoFinder output from all 47 species
Pnu_g16947 QQT2 RNA polymerase-II nuclear import factor *(GPN1) &... 0.01 OrthoFinder output from all 47 species
Ppi_g55035 QQT2 RNA polymerase-II nuclear import factor *(GPN1) &... 0.01 OrthoFinder output from all 47 species
Sam_g17832 No alias RNA polymerase-II nuclear import factor *(GPN1) &... 0.01 OrthoFinder output from all 47 species
Zm00001e038313_P002 QQT2, Zm00001e038313 GPN1 RNA polymerase-II nuclear import factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR004130 Gpn 47 269
No external refs found!