Sequence Description Alias PCC hrr Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component THO3, TEX1, AtTEX1 0.9469093483189671 3 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component ATARP2, ARP2, WRM 0.9334214310927539 10 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana 0.9326022646395071 10 Cpa|evm.model.tig00000704.50 0.9292643398531019 8 Cpa|evm.model.tig00000037.6 0.9287636068758505 10 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana SMU1 0.9269116406966506 22 Cpa|evm.model.tig00021464.50 0.9225266233687511 9 Cpa|evm.model.tig00021502.1 0.9199075725482706 8 Cpa|evm.model.tig00020848.76 0.9175367915065227 10 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter 0.9146997245717502 10 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana 0.9142546825757034 14 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.9139123361662894 26 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.9121173928534491 13 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica 0.9120244351984989 14 Cpa|evm.model.tig00001029.17 0.9100647808595103 15 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides 0.9089712945919121 16 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana 0.9087390211499111 18 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase NRS/ER, UER1 0.9086144164734664 50 Cpa|evm.model.tig00000704.40 0.9084668213615866 26 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP26, SUP32, ATUBP26 0.9082488088795108 20 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component SK20, ASK20 0.9072445694881053 21 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana UVR1, UVH3 0.9049347571108001 22 Cpa|evm.model.tig00020544.4 0.9048042296199239 41 Cpa|evm.model.tig00021464.49 Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana 0.9047748618321582 24 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A 0.9040735522515155 25 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana TIP1 0.9029154302089556 26 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component PFD4, AIP3 0.9018652361173743 31 Cpa|evm.model.tig00000319.24 0.901832214641531 28 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.900309424510653 31 Cpa|evm.model.tig00001003.41 0.9002750142202596 30 Cpa|evm.model.tig00020554.27 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.RBL component 0.8984773210720247 31 Cpa|evm.model.tig00000692.67 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD1 component PFD1 0.8982675259103274 32 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 NRPE6A, NRPD6A, NRPB6A 0.8979114753097561 33 Cpa|evm.model.tig00020538.72 0.8970076077228781 34 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component 0.8969776961004498 35 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease 0.8969623349806037 41 Cpa|evm.model.tig00000863.20 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component 0.8962904212645952 37 Cpa|evm.model.tig00021357.26 0.8962757242288596 38 Cpa|evm.model.tig00000980.5 0.8961373658446279 39 Cpa|evm.model.tig00021589.1 0.8959669048990311 53 Cpa|evm.model.tig00020554.15 0.8959567770009442 41 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1 0.8953935846684998 59 Cpa|evm.model.tig00001372.8 0.8930174500019614 43 Cpa|evm.model.tig00001003.32 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit AP19 0.892193218057237 44 Cpa|evm.model.tig00001093.5 0.8913265534678475 45 Cpa|evm.model.tig00001372.2 0.8913211704454588 46 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana 0.8896184612189032 47 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.8895581762710183 48 Cpa|evm.model.tig00001229.13 0.889074024225429 49 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana ARP5, ATARP5 0.8884035622065204 64 Cpa|evm.model.tig00000203.14 0.8883530716648339 51 Cpa|evm.model.tig00000037.18 0.8881654468466403 52 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana 0.888089013571616 75 Cpa|evm.model.tig00001085.12 0.8878215182065432 54 Cpa|evm.model.tig00021612.34 0.8875478548759639 55 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase UGP2, AtUGP2 0.8875172270665332 56 Cpa|evm.model.tig00020553.154 0.8874967842874525 64 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana 0.8855018450916768 58 Cpa|evm.model.tig00020903.16 0.885150118054362 59 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum 0.8847964167386853 60 Cpa|evm.model.tig00000789.40 0.8844818843899502 88 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein ACT11 0.8843701337439137 62 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis DHS, EDA22 0.8835013193500688 63 Cpa|evm.model.tig00020539.41 0.8825558246087832 64 Cpa|evm.model.tig00000217.24 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana SYD, CHR3 0.8819859337691985 65 Cpa|evm.model.tig00020918.9 0.8804655437874854 66 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein 0.8801629709527208 73 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana SMP2 0.8794895769228153 68 Cpa|evm.model.tig00020553.149 0.8785537293199553 69 Cpa|evm.model.tig00000241.28 U2 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana U2A' 0.8772829696290372 71 Cpa|evm.model.tig00000388.17 0.876502009417193 72 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component ATO 0.8764002090639272 73 Cpa|evm.model.tig00000241.177 0.8752539323976197 74 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana RPAC43, ATRPAC43 0.8751206083783186 75 Cpa|evm.model.tig00020848.18 snRNA-activating protein complex subunit OS=Arabidopsis thaliana 0.8746926180001138 76 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component RPN10, MCB1, ATMCB1, MBP1 0.8741360359840751 86 Cpa|evm.model.tig00000042.4 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8740293807733989 78 Cpa|evm.model.tig00021348.96 ATFKBP42, UCU2, FKBP42, TWD1 0.8726447773263014 79 Cpa|evm.model.tig00020553.148 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa subsp. japonica 0.8725834072084994 80 Cpa|evm.model.tig00021319.61 0.8704755774983867 82 Cpa|evm.model.tig00021357.13 0.8703800733211481 83 Cpa|evm.model.tig00021432.33 0.8701701673327985 84 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor UTP11, EDA14 0.8682033042292933 85 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component ATMRE11, MRE11 0.8680588164175908 86 Cpa|evm.model.tig00000829.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF2 component PSF2 0.8674717061547546 87 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase 0.8674392016082116 88 Cpa|evm.model.tig00000704.66 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor 0.8672097712062126 89 Cpa|evm.model.tig00020531.29 0.8671713691533588 90 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) AXL 0.8666337343198989 91 Cpa|evm.model.tig00000319.30 0.8654680804639817 93 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.865401043323672 94 Cpa|evm.model.tig00020553.145 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component TTN8, ATSMC1, SMC1 0.8646819123330617 96 Cpa|evm.model.tig00000144.51 Protein modification.disulfide bond formation.endoplasmic reticulum.thiol-disulfide oxidoreductase (ERO) AERO2, ERO2 0.8644638995046311 97 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor ERD2B 0.8641450221586646 98 Cpa|evm.model.tig00001234.12 0.8639783431259779 99