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  5. Cpa|evm.model.tig00020614.46

Cpa|evm.model.tig00020614.46 (ABCA4, ATATH3)


Aliases : ABCA4, ATATH3

Description : ABC transporter A family member 4 OS=Arabidopsis thaliana


Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020614.46
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene36713.t1 ATH1, ATATH1,... subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36715.t1 ATH1, ATATH1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene37700.t1 ATH1, ATATH1,... subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g18500.1 ATH1, ATATH1, ABCA2 fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Msp_g36286 ATH15, ATATH15 subfamily ABCA transporter & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 117 250
No external refs found!