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  5. Cpa|evm.model.tig00020603.25

Cpa|evm.model.tig00020603.25


Description : Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana


Gene families : OG0007393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020603.25
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cre06.g280550 No alias Zinc finger CCCH domain-containing protein 42... 0.01 OrthoFinder output from all 47 species
GSVIVT01024759001 No alias Zinc finger CCCH domain-containing protein 25 OS=Oryza... 0.01 OrthoFinder output from all 47 species
LOC_Os03g61110.1 LOC_Os03g61110 Zinc finger CCCH domain-containing protein 25 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Mp8g06500.1 No alias Zinc finger CCCH domain-containing protein 25 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004615 phosphomannomutase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 35 105
No external refs found!