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  5. Cpa|evm.model.tig00020563.189

Cpa|evm.model.tig00020563.189


No description available


Gene families : OG0001012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020563.189
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.03 OrthoFinder output from all 47 species
Adi_g086491 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g32022 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12040 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21943 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04875 ATHM2 thioredoxin *(TRX-M) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0110.g045543 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: CDS=236-865 0.02 OrthoFinder output from all 47 species
Azfi_s0144.g051537 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: CDS=12-806 0.02 OrthoFinder output from all 47 species
Ceric.09G062900.1 ATHM2, Ceric.09G062900 thioredoxin *(TRX-M) & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g14399 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08153 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g08730.1 ATHM2, LOC_Os12g08730 M-type thioredoxin 0.03 OrthoFinder output from all 47 species
Mp4g18950.1 ATHM1, THM1, TRX-M1, ATM1 M-type thioredoxin 0.03 OrthoFinder output from all 47 species
Msp_g01870 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c25_2880V3.1 ATHM1, THM1,... thioredoxin M-type 1 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010739 ATHM2 thioredoxin *(TRX-M) & original description: CDS=187-714 0.03 OrthoFinder output from all 47 species
Solyc07g063190.3.1 ATHM4, TRX-M4,... M-type thioredoxin 0.01 OrthoFinder output from all 47 species
Solyc12g013810.2.1 ATHM4, TRX-M4,... M-type thioredoxin 0.03 OrthoFinder output from all 47 species
Spa_g06833 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14111 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g52025 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018385_P001 ATHM4, TRX-M4,... M-type thioredoxin 0.02 OrthoFinder output from all 47 species
Zm00001e039586_P001 ATHM2, Zm00001e039586 M-type thioredoxin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030076 light-harvesting complex IEP HCCA
CC GO:0030089 phycobilisome IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 53 153
No external refs found!