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  5. Cpa|evm.model.tig00020557.19

Cpa|evm.model.tig00020557.19


No description available


Gene families : OG0002262 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020557.19

Target Alias Description ECC score Gene Family Method Actions
AT3G18370 NTMC2T3, SYTF,... C2 domain-containing protein 0.01 OrthoFinder output from all 47 species
Adi_g106365 NTMC2T3, SYTF,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02577 NTMC2T3, SYTF,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g02606 NTMC2T3, SYTF,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g14007 NTMC2T3, SYTF,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0102.g044545 NTMC2T3, SYTF,... not classified & original description: CDS=276-2672 0.02 OrthoFinder output from all 47 species
Ceric.15G048600.1 NTMC2T3, SYTF,... not classified & original description: pacid=50640643... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004772 NTMC2T3, SYTF,... not classified & original description: CDS=151-2862 0.02 OrthoFinder output from all 47 species
Solyc03g119440.3.1 NTMC2T3, SYTF,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000002 mitochondrial genome maintenance IEP HCCA
CC GO:0000262 mitochondrial chromosome IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 601 701
IPR000008 C2_dom 411 511
IPR000008 C2_dom 282 356
No external refs found!