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  5. Cpa|evm.model.tig00020554.69

Cpa|evm.model.tig00020554.69


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REIL maturation factor


Gene families : OG0003289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003289_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.69
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Als_g02462 FZF LSU processome maturation factor *(REIL) & original... 0.01 OrthoFinder output from all 47 species
Aob_g24311 FZF LSU processome maturation factor *(REIL) & original... 0.01 OrthoFinder output from all 47 species
LOC_Os06g47840.1 LOC_Os06g47840 REIL LSU processome maturation factor 0.01 OrthoFinder output from all 47 species
Zm00001e013110_P001 Zm00001e013110 REIL LSU processome maturation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 68 92
No external refs found!