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  5. Cpa|evm.model.tig00020553.156

Cpa|evm.model.tig00020553.156


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit


Gene families : OG0002649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020553.156
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00238440 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
AT4G31480 No alias Coatomer, beta subunit 0.02 OrthoFinder output from all 47 species
AT4G31490 No alias Coatomer, beta subunit 0.03 OrthoFinder output from all 47 species
Adi_g109510 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Aev_g43648 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g12957 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Als_g50512 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Aob_g05342 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Aop_g08029 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0279.g062259 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G093900.1 Ceric.04G093900 subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ceric.24G063400.1 Ceric.24G063400 subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Cre04.g217921 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 OrthoFinder output from all 47 species
Ehy_g08642 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01016151001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
GSVIVT01035511001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Gb_03760 No alias subunit beta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
Gb_23100 No alias subunit beta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Len_g12104 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
MA_10432097g0020 No alias subunit beta of cargo adaptor F-subcomplex 0.01 OrthoFinder output from all 47 species
Mp5g08450.1 No alias subunit beta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Msp_g15814 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Nbi_g02428 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Pir_g55147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33812 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Smo160340 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Solyc01g007150.3.1 Solyc01g007150 subunit beta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Solyc10g081920.2.1 Solyc10g081920 subunit beta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
Spa_g12851 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Zm00001e009041_P001 Zm00001e009041 subunit beta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Zm00001e017416_P001 Zm00001e017416 subunit beta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e025465_P001 Zm00001e025465 subunit beta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR029446 COPB1_appendage_platform_dom 795 884
IPR002553 Clathrin/coatomer_adapt-like_N 17 470
IPR011710 Coatomer_bsu_C 648 788
No external refs found!