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  5. Cpa|evm.model.tig00020544.6

Cpa|evm.model.tig00020544.6


No description available


Gene families : OG0006078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020544.6

Target Alias Description ECC score Gene Family Method Actions
AT1G63810 No alias CONTAINS InterPro DOMAIN/s: Nrap protein... 0.04 OrthoFinder output from all 47 species
Aob_g23371 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.01 OrthoFinder output from all 47 species
Cba_g13464 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.02 OrthoFinder output from all 47 species
Ceric.24G063300.1 Ceric.24G063300 pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.03 OrthoFinder output from all 47 species
Dac_g11152 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.02 OrthoFinder output from all 47 species
Dcu_g25897 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.01 OrthoFinder output from all 47 species
GSVIVT01018952001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_07104 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.01 OrthoFinder output from all 47 species
LOC_Os12g06910.1 LOC_Os12g06910 pre-40S ribosomal subunit assembly factor (UTP22) 0.01 OrthoFinder output from all 47 species
Lfl_g02369 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.01 OrthoFinder output from all 47 species
MA_10427874g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436389g0010 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.01 OrthoFinder output from all 47 species
Mp6g08990.1 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.03 OrthoFinder output from all 47 species
Ore_g26767 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024789 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.01 OrthoFinder output from all 47 species
Smo407792 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g085230.3.1 Solyc02g085230 pre-40S ribosomal subunit assembly factor (UTP22) 0.01 OrthoFinder output from all 47 species
Zm00001e018445_P001 Zm00001e018445 pre-40S ribosomal subunit assembly factor (UTP22) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR035367 Nrap_D2 234 359
IPR035082 Nrap_D1 97 227
IPR035368 Nrap_D3 379 515
IPR035369 Nrap_D4 545 706
IPR035370 Nrap_D5 710 863
No external refs found!