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  5. Cpa|evm.model.tig00001428.2

Cpa|evm.model.tig00001428.2


No description available


Gene families : OG0005493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001428.2

Target Alias Description ECC score Gene Family Method Actions
AT3G01160 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.1 OrthoFinder output from all 47 species
Adi_g054865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35135.t1 Aspi01Gene35135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g029829 No alias not classified & original description: CDS=64-2484 0.02 OrthoFinder output from all 47 species
Ceric.24G052900.1 Ceric.24G052900 not classified & original description: pacid=50628958... 0.05 OrthoFinder output from all 47 species
Cre10.g452500 No alias No description available 0.07 OrthoFinder output from all 47 species
Dac_g16396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07705 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01007226001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os07g34740.1 LOC_Os07g34740 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g25070.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g19811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo268496 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo268642 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g083470.3.1 Solyc02g083470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g08975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05616 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e035150_P001 Zm00001e035150 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012580 NUC153 542 566
No external refs found!