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  5. Cpa|evm.model.tig00001368.15

Cpa|evm.model.tig00001368.15


Description : ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001368.15
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00199450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G54350 No alias ABC transporter family protein 0.02 OrthoFinder output from all 47 species
Aev_g06132 No alias subfamily ABCD transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g04497 No alias subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05082 No alias subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025018 No alias subfamily ABCD transporter & original description: CDS=1-1980 0.04 OrthoFinder output from all 47 species
Cba_g14575 No alias subfamily ABCD transporter & original description: none 0.01 OrthoFinder output from all 47 species
Cre10.g439000 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Dde_g00832 No alias subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06061 No alias subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036685001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_27197 No alias subfamily ABCD transporter 0.01 OrthoFinder output from all 47 species
LOC_Os01g11946.1 LOC_Os01g11946 subfamily ABCD transporter 0.05 OrthoFinder output from all 47 species
Len_g00704 No alias subfamily ABCD transporter & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g40224 No alias subfamily ABCD transporter & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g18020.1 No alias subfamily ABCD transporter 0.04 OrthoFinder output from all 47 species
Nbi_g11391 No alias subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38697 No alias subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42023 No alias subfamily ABCD transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31759 No alias subfamily ABCD transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04568 No alias subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo424776 No alias Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Smo446842 No alias Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Solyc12g017420.2.1 Solyc12g017420 subfamily ABCD transporter 0.01 OrthoFinder output from all 47 species
Zm00001e026058_P001 Zm00001e026058 subfamily ABCD transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 443 600
IPR011527 ABC1_TM_dom 172 222
No external refs found!