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  5. Cpa|evm.model.tig00001366.21

Cpa|evm.model.tig00001366.21 (ATVLN2, VLN2)


Aliases : ATVLN2, VLN2

Description : Cytoskeleton.microfilament network.actin polymerisation.villin actin-crosslinking factor


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001366.21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00248490 ATVLN2, VLN2,... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Aev_g12597 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g02593 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g40168 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0277.g061478 ATVLN3, VLN3 villin actin-crosslinking factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g04950 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11783 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g10002 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01029237001 VLN4, ATVLN4 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
GSVIVT01033261001 ATVLN2, VLN2 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
LOC_Os03g24220.2 ATVLN2, VLN2,... villin actin-crosslinking factor 0.01 OrthoFinder output from all 47 species
Len_g29289 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07820 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09807 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18012 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60064 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002599 VLN4, ATVLN4 villin actin-crosslinking factor & original description:... 0.02 OrthoFinder output from all 47 species
Tin_g15028 ATVLN3, VLN3 villin acTin-crosslinking factor & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e001712_P002 ATVLN2, VLN2,... villin actin-crosslinking factor 0.01 OrthoFinder output from all 47 species
Zm00001e028314_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 813 848
IPR007123 Gelsolin-like_dom 262 320
IPR007123 Gelsolin-like_dom 582 622
No external refs found!