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  5. Cpa|evm.model.tig00001307.8

Cpa|evm.model.tig00001307.8


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.TFB3-type subunit


Gene families : OG0006201 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006201_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001307.8
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Aev_g00358 No alias scaffold component *(TFB3) of TFIIh basal transcription... 0.02 OrthoFinder output from all 47 species
Mp2g25930.1 No alias scaffolding subunit TFB3 of CAK kinase module. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR015877 Cdk-activating_kinase_MAT1_cen 30 153
No external refs found!