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  5. Cpa|evm.model.tig00001302.6

Cpa|evm.model.tig00001302.6


Description : Cell cycle.interphase.DNA replication.initiation.CDC45 auxiliary factor


Gene families : OG0008920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001302.6
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00070320 CDC45,... Cell cycle.interphase.DNA replication.initiation.CDC45... 0.01 OrthoFinder output from all 47 species
AT3G25100 CDC45 cell division cycle 45 0.04 OrthoFinder output from all 47 species
Aop_g04657 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50014.t1 CDC45, Aspi01Gene50014 cell cycle auxiliary factor *(CDC45) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.22G068600.1 CDC45, Ceric.22G068600 cell cycle auxiliary factor *(CDC45) & original... 0.05 OrthoFinder output from all 47 species
Cre06.g270250 No alias Cell cycle.interphase.DNA replication.initiation.CDC45... 0.05 OrthoFinder output from all 47 species
GSVIVT01000797001 CDC45 Cell cycle.interphase.DNA replication.initiation.CDC45... 0.04 OrthoFinder output from all 47 species
Gb_40696 CDC45 CDC45 cell cycle auxiliary factor 0.11 OrthoFinder output from all 47 species
LOC_Os11g03430.1 CDC45, LOC_Os11g03430 CDC45 cell cycle auxiliary factor 0.02 OrthoFinder output from all 47 species
LOC_Os12g03130.1 CDC45, LOC_Os12g03130 CDC45 cell cycle auxiliary factor 0.02 OrthoFinder output from all 47 species
MA_94094g0010 CDC45 CDC45 cell cycle auxiliary factor 0.08 OrthoFinder output from all 47 species
Mp6g20220.1 CDC45 CDC45 cell cycle auxiliary factor 0.11 OrthoFinder output from all 47 species
Msp_g11586 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09206 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15977 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.01 OrthoFinder output from all 47 species
Solyc09g059440.1.1 CDC45, Solyc09g059440 CDC45 cell cycle auxiliary factor 0.07 OrthoFinder output from all 47 species
Spa_g00437 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06817 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031144 proteasome localization IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003874 CDC45 26 191
IPR003874 CDC45 166 344
IPR003874 CDC45 391 530
No external refs found!