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  5. Cpa|evm.model.tig00001299.12

Cpa|evm.model.tig00001299.12


Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.CTF7 N-acetyltransferase cohesin cofactor


Gene families : OG0007130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001299.12
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Aop_g61813 CTF7 N-acetyltransferase cohesin cofactor *(CTF7) & original... 0.04 OrthoFinder output from all 47 species
Ceric.16G081900.1 CTF7, Ceric.16G081900 N-acetyltransferase cohesin cofactor *(CTF7) & original... 0.02 OrthoFinder output from all 47 species
Mp1g16030.1 CTF7 N-acetyltransferase cohesin cofactor (CTF7) 0.09 OrthoFinder output from all 47 species
Solyc01g007160.4.1 CTF7, Solyc01g007160 N-acetyltransferase cohesin cofactor (CTF7) 0.08 OrthoFinder output from all 47 species
Tin_g03857 CTF7 N-acetyltransferase cohesin cofactor *(CTF7) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR028005 AcTrfase_ESCO_Znf_dom 254 294
IPR028009 ESCO_Acetyltransf_dom 407 473
No external refs found!