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  5. Cpa|evm.model.tig00001214.5

Cpa|evm.model.tig00001214.5


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.SERRATE component


Gene families : OG0003096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001214.5

Target Alias Description ECC score Gene Family Method Actions
Ala_g05956 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.01 OrthoFinder output from all 47 species
Als_g13237 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000578 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Ceric.03G039000.1 SE, Ceric.03G039000 component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Dcu_g14201 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Pir_g04707 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.01 OrthoFinder output from all 47 species
Tin_g09411 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Zm00001e003610_P002 SE, Zm00001e003610 C2H2 zinc finger transcription factor. component SERRATE... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007042 SERRATE/Ars2_C 461 514
IPR021933 SERRATE/Ars2_N 174 257
IPR025239 DUF4187 366 399
No external refs found!