Aliases : PRT6
Description : Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6)
Gene families : OG0003565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003565_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00001107.13 | |
Cluster | HCCA: Cluster_87 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G02310 | PRT6 | proteolysis 6 | 0.01 | OrthoFinder output from all 47 species | |
Aob_g27314 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.29G053500.1 | PRT6, Ceric.29G053500 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.32G042600.1 | PRT6, Ceric.32G042600 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01034167001 | PRT6 | E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04298 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.01 | OrthoFinder output from all 47 species | |
MA_387g0010 | PRT6 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.01 | OrthoFinder output from all 47 species | |
MA_767141g0010 | PRT6 | E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
Sam_g18069 | No alias | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e016914_P004 | PRT6, Zm00001e016914 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | HCCA |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:2001070 | starch binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003126 | Znf_UBR | 8 | 68 |
No external refs found! |