Cpa|evm.model.tig00001093.6 (SYT5, NTMC2T2.1,...)


Aliases : SYT5, NTMC2T2.1, SYTE, NTMC2TYPE2.1, ATSYTE

Description : Synaptotagmin-5 OS=Arabidopsis thaliana


Gene families : OG0000290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001093.6

Target Alias Description ECC score Gene Family Method Actions
Adi_g020798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08935 AGD12, ZAC not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g47792 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene56009.t1 SRC2, (AT)SRC2,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0304.g063875 No alias not classified & original description: CDS=63-827 0.02 OrthoFinder output from all 47 species
Cba_g01388 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g11151 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.11G054800.1 SYT5, NTMC2T2.1,... not classified & original description: pacid=50596585... 0.02 OrthoFinder output from all 47 species
Ceric.17G021000.1 Ceric.17G021000 not classified & original description: pacid=50617770... 0.02 OrthoFinder output from all 47 species
Dac_g21792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09548 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g10786 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g18893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g42710.1 LOC_Os02g42710 Elicitor-responsive protein 3 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015077 SYT5, NTMC2T2.1,... not classified & original description: CDS=311-1150 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022502 No alias not classified & original description: CDS=367-861 0.01 OrthoFinder output from all 47 species
Spa_g09706 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g30809 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e023088_P001 Zm00001e023088 Elicitor-responsive protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 589 688
IPR000008 C2_dom 459 558
IPR000008 C2_dom 724 824
IPR000008 C2_dom 157 257
IPR000008 C2_dom 310 402
No external refs found!