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  5. Cpa|evm.model.tig00001093.5

Cpa|evm.model.tig00001093.5


No description available


Gene families : OG0006929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001093.5
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT5G53800 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.03 OrthoFinder output from all 47 species
Adi_g023955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0273.g061329 No alias not classified & original description: CDS=1-900 0.03 OrthoFinder output from all 47 species
Cre03.g176050 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os04g44800.1 LOC_Os04g44800 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g15912 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g32661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo139660 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc12g013790.3.1 Solyc12g013790 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e007435_P001 Zm00001e007435 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA

No InterPro domains available for this sequence

No external refs found!