Cpa|evm.model.tig00001086.22 (VPS35B)

Aliases : VPS35B

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component

Gene families : OG0003496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003496_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001086.22

Target	Alias	Description	ECC score	Gene Family Method
AT2G17790	ZIP3, VPS35A	VPS35 homolog A	0.02	OrthoFinder output from all 47 species
Adi_g011699	VPS35B	component *(VPS35) of Retromer protein recycling complex...	0.02	OrthoFinder output from all 47 species
Aev_g16183	VPS35B	component *(VPS35) of Retromer protein recycling complex...	0.01	OrthoFinder output from all 47 species
Ceric.32G026000.1	VPS35B, Ceric.32G026000	component *(VPS35) of Retromer protein recycling complex...	0.01	OrthoFinder output from all 47 species
Dde_g10908	VPS35B	component *(VPS35) of Retromer protein recycling complex...	0.02	OrthoFinder output from all 47 species
Tin_g02135	VPS35B	component *(VPS35) of Retromer protein recycling complex...	0.01	OrthoFinder output from all 47 species
Zm00001e006031_P002	VPS35B, Zm00001e006031	component VPS35 of Retromer protein recycling complex	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016482	cytosolic transport	None	Extended
CC	GO:0030906	retromer, cargo-selective complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042147	retrograde transport, endosome to Golgi	IEA	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005378	Vps35	19	740

External Links

No external refs found!