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  5. Cpa|evm.model.tig00001052.10

Cpa|evm.model.tig00001052.10


No description available


Gene families : OG0004903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001052.10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00136p00057760 evm_27.TU.AmTr_v1... Nucleotide metabolism.purines.ribonucleotide (RN)... 0.01 OrthoFinder output from all 47 species
AT1G36280 No alias L-Aspartase-like family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011385 No alias adenylosuccinate lyase *(PUR8) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g03976 No alias adenylosuccinate lyase *(PUR8) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.35G009800.1 Ceric.35G009800 adenylosuccinate lyase *(PUR8) & original description:... 0.03 OrthoFinder output from all 47 species
Cre13.g565450 No alias Nucleotide metabolism.purines.ribonucleotide (RN)... 0.03 OrthoFinder output from all 47 species
GSVIVT01016375001 No alias Nucleotide metabolism.purines.ribonucleotide (RN)... 0.01 OrthoFinder output from all 47 species
MA_10435603g0010 No alias adenylosuccinate lyase 0.01 OrthoFinder output from all 47 species
Mp2g03840.1 No alias adenylosuccinate lyase 0.02 OrthoFinder output from all 47 species
Ore_g19227 No alias adenylosuccinate lyase *(PUR8) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008524 No alias adenylosuccinate lyase *(PUR8) & original description:... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009802 No alias adenylosuccinate lyase *(PUR8) & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014750 No alias not classified & original description: CDS=1-504 0.02 OrthoFinder output from all 47 species
Sam_g11158 No alias adenylosuccinate lyase *(PUR8) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g006530.3.1 Solyc07g006530 adenylosuccinate lyase 0.02 OrthoFinder output from all 47 species
Spa_g31108 No alias adenylosuccinate lyase *(PUR8) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14449 No alias adenylosuccinate lyase *(PUR8) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001485_P001 Zm00001e001485 adenylosuccinate lyase 0.02 OrthoFinder output from all 47 species
Zm00001e038307_P004 Zm00001e038307 adenylosuccinate lyase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003937 IMP cyclohydrolase activity IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022761 Fumarate_lyase_N 174 392
IPR019468 AdenyloSucc_lyase_C 465 546
No external refs found!