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  5. Cpa|evm.model.tig00000944.21

Cpa|evm.model.tig00000944.21 (HAP1, MEE63, MAGO)


Aliases : HAP1, MEE63, MAGO

Description : RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component


Gene families : OG0003958 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000944.21
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00121p00130180 HAP1, MEE63,... RNA processing.RNA quality control Exon Junction complex... 0.03 OrthoFinder output from all 47 species
Adi_g040716 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Adi_g105543 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Als_g27005 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Aop_g36808 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Aspi01Gene30613.t1 HAP1, MEE63,... component *(Magoh) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Cba_g11051 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Cre09.g392692 HAP1, MEE63, MAGO RNA processing.RNA quality control Exon Junction complex... 0.06 OrthoFinder output from all 47 species
Dac_g03060 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
GSVIVT01013876001 HAP1, MEE63, MAGO RNA processing.RNA quality control Exon Junction complex... 0.01 OrthoFinder output from all 47 species
LOC_Os08g01660.1 HAP1, MEE63,... component Magoh of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g18880.1 HAP1, MEE63,... component Magoh of RNA quality control Exon Junction complex 0.06 OrthoFinder output from all 47 species
Mp5g13520.1 HAP1, MEE63, MAGO component Magoh of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Nbi_g24780 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Pir_g61463 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Pp3c1_16440V3.1 HAP1, MEE63,... mago nashi family protein 0.01 OrthoFinder output from all 47 species
Pp3c2_21720V3.1 HAP1, MEE63,... mago nashi family protein 0.03 OrthoFinder output from all 47 species
Solyc03g093680.4.1 HAP1, MEE63,... component Magoh of RNA quality control Exon Junction complex 0.01 OrthoFinder output from all 47 species
Spa_g09540 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Tin_g08945 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Tin_g23631 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Zm00001e021888_P001 HAP1, MEE63,... component Magoh of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEA Interproscan
CC GO:0035145 exon-exon junction complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030030 cell projection organization IEP HCCA
BP GO:0030031 cell projection assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0034464 BBSome IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044782 cilium organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060271 cilium assembly IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0120031 plasma membrane bounded cell projection assembly IEP HCCA
BP GO:0120036 plasma membrane bounded cell projection organization IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004023 Mago_nashi 10 151
No external refs found!