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  5. Cpa|evm.model.tig00000789.38

Cpa|evm.model.tig00000789.38


No description available


Gene families : OG0005501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000789.38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00182750 NOF1,... RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.02 OrthoFinder output from all 47 species
AT1G17690 NOF1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Cre04.g218300 NOF1 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.05 OrthoFinder output from all 47 species
Dcu_g07063 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
LOC_Os05g22920.1 NOF1, LOC_Os05g22920 rDNA transcriptional regulator (NOF1) 0.03 OrthoFinder output from all 47 species
Lfl_g09232 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Mp7g03720.1 NOF1 rDNA transcriptional regulator (NOF1) 0.02 OrthoFinder output from all 47 species
Sam_g12400 No alias regulatory protein *(NOF1) of rDNA transcription &... 0.01 OrthoFinder output from all 47 species
Solyc07g009350.4.1 NOF1, Solyc07g009350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g18828 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Zm00001e039338_P003 NOF1, Zm00001e039338 rDNA transcriptional regulator (NOF1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010678 UTP25 254 316
No external refs found!