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  5. Cpa|evm.model.tig00000704.65

Cpa|evm.model.tig00000704.65


Description : Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.NUF2 component


Gene families : OG0006515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000704.65
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00016840 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
Ala_g02742 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.01 OrthoFinder output from all 47 species
Aop_g04468 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023538 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.01 OrthoFinder output from all 47 species
Ceric.38G047400.1 Ceric.38G047400 component *(NUF2) of NDC80 outer kinetochore complex &... 0.09 OrthoFinder output from all 47 species
Cre01.g008450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.07 OrthoFinder output from all 47 species
Dcu_g10000 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.05 OrthoFinder output from all 47 species
Gb_15278 No alias component NUF2 of NDC80 outer kinetochore complex 0.1 OrthoFinder output from all 47 species
LOC_Os03g38010.1 LOC_Os03g38010 component NUF2 of NDC80 outer kinetochore complex 0.05 OrthoFinder output from all 47 species
LOC_Os08g06600.1 LOC_Os08g06600 component NUF2 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
Len_g08343 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
MA_103013g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_66453g0010 No alias component NUF2 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
Mp3g15760.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.09 OrthoFinder output from all 47 species
Nbi_g06908 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g02000 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.05 OrthoFinder output from all 47 species
Spa_g01731 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
Spa_g44314 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e006361_P001 Zm00001e006361 component NUF2 of NDC80 outer kinetochore complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEA Interproscan
CC GO:0031262 Ndc80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005549 Kinetochore_Nuf2_N 3 140
No external refs found!