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  5. Cpa|evm.model.tig00000704.18

Cpa|evm.model.tig00000704.18


No description available


Gene families : OG0005810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000704.18
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Aev_g02041 No alias pre-40S ribosomal subunit assembly factor *(RRP7) &... 0.02 OrthoFinder output from all 47 species
Cre01.g052200 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g49620.1 LOC_Os02g49620 pre-40S ribosomal subunit assembly factor (RRP7) 0.01 OrthoFinder output from all 47 species
Lfl_g05307 No alias pre-40S ribosomal subunit assembly factor *(RRP7) &... 0.01 OrthoFinder output from all 47 species
Smo420728 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo422020 No alias No description available 0.01 OrthoFinder output from all 47 species
Solyc02g089600.3.1 Solyc02g089600 pre-40S ribosomal subunit assembly factor (RRP7) 0.04 OrthoFinder output from all 47 species
Solyc03g046350.3.1 Solyc03g046350 pre-40S ribosomal subunit assembly factor (RRP7) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024326 RRP7_C 21 140
No external refs found!