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  5. Cpa|evm.model.tig00000615.81

Cpa|evm.model.tig00000615.81 (SAMDC)


Aliases : SAMDC

Description : Polyamine metabolism.spermidine/spermine.synthesis.S-adenosyl methionine decarboxylase


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.81
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00164800 evm_27.TU.AmTr_v1... Polyamine metabolism.putrescine.synthesis.cytosolic... 0.01 OrthoFinder output from all 47 species
AT3G25570 No alias Adenosylmethionine decarboxylase family protein 0.01 OrthoFinder output from all 47 species
Als_g08752 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g25482 No alias ornithine decarboxylase & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g11559 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g05030 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
MA_10429775g0030 No alias S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Ore_g02769 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g08792 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10575 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 199 309
IPR001985 S-AdoMet_decarboxylase 7 180
IPR022644 De-COase2_N 372 550
IPR022643 De-COase2_C 627 700
No external refs found!