Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein
Gene families : OG0008242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008242_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00000586.13 | |
Cluster | HCCA: Cluster_71 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g31211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g17383 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Cba_g08971 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g05393 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g40087 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Pir_g19059 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g02713 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g28936 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | HCCA |
MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 100 | 141 |
No external refs found! |