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  5. Cpa|evm.model.tig00000459.15

Cpa|evm.model.tig00000459.15


Description : Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000459.15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00115620 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00048p00146310 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT1G08350 No alias Endomembrane protein 70 protein family 0.02 OrthoFinder output from all 47 species
AT1G10950 TMN1, AtTMN1 transmembrane nine 1 0.05 OrthoFinder output from all 47 species
AT5G37310 No alias Endomembrane protein 70 protein family 0.02 OrthoFinder output from all 47 species
Adi_g002017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041686 TMN1, AtTMN1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g057367 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g057368 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g05218 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27302 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03806 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24285.t1 TMN1, AtTMN1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34086.t1 Aspi01Gene34086 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009541 No alias not classified & original description: CDS=81-1871 0.02 OrthoFinder output from all 47 species
Azfi_s2385.g111052 No alias not classified & original description: CDS=238-1536 0.02 OrthoFinder output from all 47 species
Ceric.22G054000.1 Ceric.22G054000 not classified & original description: pacid=50613875... 0.01 OrthoFinder output from all 47 species
Ceric.26G022100.1 TMN1, AtTMN1,... not classified & original description: pacid=50599543... 0.02 OrthoFinder output from all 47 species
Ceric.34G054800.1 TMN1, AtTMN1,... not classified & original description: pacid=50624162... 0.03 OrthoFinder output from all 47 species
Cre01.g024350 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre14.g611850 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre16.g675958 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g08833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10047 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10048 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08970 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011574001 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023343001 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01026057001 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_02686 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_08315 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os03g13380.1 LOC_Os03g13380 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g07910.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os12g07670.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g07740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23629 TMN1, AtTMN1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_103022g0010 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10431134g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g16980.1 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp3g06160.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g07580.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g10835 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g02238 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06736 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45907 TMN1, AtTMN1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g10846 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005260 No alias not classified & original description: CDS=162-1730 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020786 TMN1, AtTMN1 not classified & original description: CDS=134-1804 0.02 OrthoFinder output from all 47 species
Smo163520 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo170330 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc04g014570.3.1 Solyc04g014570 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc11g022540.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g17201 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40885 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47696 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50972 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14792 TMN1, AtTMN1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e038626_P002 Zm00001e038626 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e040192_P001 Zm00001e040192 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 1 95
No external refs found!