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  5. Cpa|evm.model.tig00000448.80

Cpa|evm.model.tig00000448.80 (ORF158)


Aliases : ORF158

Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000448.80
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Als_g31501 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.96 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.97 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.98 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000405.12 No alias No description available 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000473.16 No alias RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000607.5 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000658.19 No alias No description available 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000788.12 No alias No description available 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000788.14 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000788.15 No alias No description available 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.52 ORF158 No description available 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001066.2 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001182.3 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001231.8 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020510.80 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.15 No alias No description available 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.72 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020849.2 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.58 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder output from all 47 species ne
Cpa|evm.model.tig00021254.52 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.30 No alias No description available 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021518.13 ORF158 No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021571.43 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021608.9 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.06 OrthoFinder output from all 47 species
Ehy_g22643 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g40411 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g00801 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g18685 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 1069 1171
IPR000477 RT_dom 276 424
No external refs found!