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  5. Cpa|evm.model.tig00000403.40

Cpa|evm.model.tig00000403.40


Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).exonuclease (EXO1)


Gene families : OG0003251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000403.40
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00265020 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.02 OrthoFinder output from all 47 species
Aspi01Gene58842.t2 Aspi01Gene58842 homologous recombination repair exonuclease *(EXO1) &... 0.01 OrthoFinder output from all 47 species
Azfi_s0009.g011947 No alias not classified & original description: CDS=18-1211 0.01 OrthoFinder output from all 47 species
Ceric.01G025500.1 Ceric.01G025500 homologous recombination repair exonuclease *(EXO1) &... 0.02 OrthoFinder output from all 47 species
Cre07.g353950 No alias DNA damage response.DNA repair mechanisms.homologous... 0.02 OrthoFinder output from all 47 species
GSVIVT01008397001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.04 OrthoFinder output from all 47 species
GSVIVT01021316001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.03 OrthoFinder output from all 47 species
Gb_14686 No alias homologous recombination repair exonuclease (EXO1) 0.01 OrthoFinder output from all 47 species
LOC_Os01g56940.1 LOC_Os01g56940 homologous recombination repair exonuclease (EXO1) 0.01 OrthoFinder output from all 47 species
Msp_g36441 No alias homologous recombination repair exonuclease *(EXO1) &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014655 No alias homologous recombination repair exonuclease *(EXO1) &... 0.01 OrthoFinder output from all 47 species
Sam_g35172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071530.2.1 Solyc02g071530 homologous recombination repair exonuclease (EXO1) 0.03 OrthoFinder output from all 47 species
Solyc03g119070.2.1 Solyc03g119070 homologous recombination repair exonuclease (EXO1) 0.01 OrthoFinder output from all 47 species
Tin_g11001 No alias homologous recombination repair exonuclease *(EXO1) &... 0.02 OrthoFinder output from all 47 species
Zm00001e019645_P001 Zm00001e019645 homologous recombination repair exonuclease (EXO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
  		•
    MF GO:0030234 enzyme regulator activity IEP HCCA
    MF GO:0030695 GTPase regulator activity IEP HCCA
    BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
    MF GO:0032553 ribonucleotide binding IEP HCCA
    MF GO:0032555 purine ribonucleotide binding IEP HCCA
    MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
    CC GO:0043226 organelle IEP HCCA
    CC GO:0043227 membrane-bounded organelle IEP HCCA
    CC GO:0043229 intracellular organelle IEP HCCA
    CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
    BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
    BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
    BP GO:0048478 replication fork protection IEP HCCA
    BP GO:0048519 negative regulation of biological process IEP HCCA
    BP GO:0048523 negative regulation of cellular process IEP HCCA
    BP GO:0048583 regulation of response to stimulus IEP HCCA
    BP GO:0051052 regulation of DNA metabolic process IEP HCCA
    BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
    BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
    BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
    MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
    BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
    MF GO:0097367 carbohydrate derivative binding IEP HCCA
    MF GO:0098772 molecular function regulator activity IEP HCCA
    MF GO:0140677 molecular function activator activity IEP HCCA
    BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
    BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
    InterPro domains Description Start Stop
    IPR006086 XPG-I_dom 141 225
    IPR006085 XPG_DNA_repair_N 1 99
    No external refs found!