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  5. Cpa|evm.model.tig00000310.32

Cpa|evm.model.tig00000310.32


Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein


Gene families : OG0008242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000310.32
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Als_g31211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15191 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g17383 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g08971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40087 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g19059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 100 142
No external refs found!