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  5. Cpa|evm.model.tig00000254.47

Cpa|evm.model.tig00000254.47 (ATPDX1.3, RSR4,...)


Aliases : ATPDX1.3, RSR4, ATPDX1, PDX1.3, PDX1

Description : Coenzyme metabolism.pyridoxalphosphate synthesis.pyridoxal 5-phosphate synthase complex.synthase component


Gene families : OG0001625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000254.47

Target Alias Description ECC score Gene Family Method Actions
AT3G16050 ATPDX1.2, A37, PDX1.2 pyridoxine biosynthesis 1.2 0.01 OrthoFinder output from all 47 species
Aev_g24421 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Ala_g13022 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Aop_g07922 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Ceric.04G042900.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.01 OrthoFinder output from all 47 species
Dde_g21438 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
GSVIVT01024735001 ATPDX1.3, RSR4,... Pyridoxal 5-phosphate synthase subunit PDX1.3... 0.02 OrthoFinder output from all 47 species
LOC_Os07g01020.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.02 OrthoFinder output from all 47 species
Lfl_g40581 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Nbi_g27713 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.01 OrthoFinder output from all 47 species
Ore_g31171 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Smo146305 ATPDX1.3, RSR4,... Coenzyme metabolism.pyridoxalphosphate... 0.05 OrthoFinder output from all 47 species
Spa_g00335 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 14 219
No external refs found!