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  5. Cpa|evm.model.tig00000248.12

Cpa|evm.model.tig00000248.12 (AMSH2)


Aliases : AMSH2

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.AMSH3 deubiquitinase


Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000248.12

Target Alias Description ECC score Gene Family Method Actions
Adi_g012325 AMSH1 deubiquitinase *(AMSH) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene68940.t1 AMSH3, Aspi01Gene68940 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42609 AMSH1 deubiquitinase *(AMSH) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g00586 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g14340.1 AMSH1 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species
Msp_g09618 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02175 AMSH1 deubiquitinase *(AMSH) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g01316 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_16700V3.1 AMSH1, Pp3c6_16700 associated molecule with the SH3 domain of STAM 1 0.01 OrthoFinder output from all 47 species
Ppi_g05194 AMSH1 deubiquitinase *(AMSH) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022666 AMSH1 deubiquitinase *(AMSH) & original description: CDS=122-1471 0.01 OrthoFinder output from all 47 species
Zm00001e017595_P001 AMSH1, Zm00001e017595 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 1456 1538
No external refs found!