1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000241.57

Cpa|evm.model.tig00000241.57


Description : Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 211.9) & Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0001684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001684_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000241.57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00210700 GCH, ATGCH,... Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional... 0.01 OrthoFinder output from all 47 species
AT5G64300 GCH, ATGCH, RFD1, ATRIBA1 GTP cyclohydrolase II 0.01 OrthoFinder output from all 47 species
Adi_g023433 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Cre14.g620350 GCH, ATGCH, RFD1, ATRIBA1 Probable bifunctional riboflavin biosynthesis protein... 0.02 OrthoFinder output from all 47 species
Dac_g12652 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.01 OrthoFinder output from all 47 species
Dde_g03870 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38570.1 LOC_Os05g38570 Probable monofunctional riboflavin biosynthesis protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008616 queuosine biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009163 nucleoside biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP HCCA
BP GO:0042455 ribonucleoside biosynthetic process IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043174 nucleoside salvage IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046116 queuosine metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901659 glycosyl compound biosynthetic process IEP HCCA
BP GO:1990397 queuosine salvage IEP HCCA
InterPro domains Description Start Stop
IPR032677 GTP_cyclohydro_II 196 360
IPR000014 PAS 22 109
No external refs found!