1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000241.149

Cpa|evm.model.tig00000241.149


Description : Pheophytinase, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002909_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000241.149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00159350 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
AT5G38520 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g001161 No alias chlorophyll dephytylase *(CLD) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g14610 No alias chlorophyll dephytylase *(CLD) & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g664350 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
Dde_g06402 No alias chlorophyll dephytylase *(CLD) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037084001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Len_g22252 No alias chlorophyll dephytylase *(CLD) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30794 No alias chlorophyll dephytylase *(CLD) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07646 No alias chlorophyll dephytylase *(CLD) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13507 No alias chlorophyll dephytylase *(CLD) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006891 No alias not classified & original description: CDS=1023-2204 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 142 385
IPR006121 HMA_dom 52 106
No external refs found!