Cpa|evm.model.tig00000237.33

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin

Gene families : OG0005260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005260_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000237.33

Target	Alias	Description	ECC score	Gene Family Method
AT4G27640	No alias	ARM repeat superfamily protein	0.02	OrthoFinder output from all 47 species
Als_g05135	No alias	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.02	OrthoFinder output from all 47 species
Aob_g12570	No alias	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.01	OrthoFinder output from all 47 species
Aop_g07002	No alias	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.01	OrthoFinder output from all 47 species
Azfi_s0112.g045788	No alias	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.03	OrthoFinder output from all 47 species
Ceric.27G000100.1	Ceric.27G000100	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g04972	No alias	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.01	OrthoFinder output from all 47 species
Dde_g01746	No alias	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.01	OrthoFinder output from all 47 species
LOC_Os03g15540.1	LOC_Os03g15540	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_10061366g0010	No alias	IMB4 nucleocytoplasmic import karyopherin	0.02	OrthoFinder output from all 47 species
Mp1g01470.1	No alias	IMB4 nucleocytoplasmic import karyopherin	0.02	OrthoFinder output from all 47 species
Nbi_g13492	No alias	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.01	OrthoFinder output from all 47 species
Tin_g15675	No alias	nucleocytoplasmic import karyopherin *(IMB4) & original...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005730	nucleolus	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001494	Importin-beta_N	29	94

External Links

No external refs found!

Cpa|evm.model.tig00000237.33

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation