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  5. Cpa|evm.model.tig00000217.26

Cpa|evm.model.tig00000217.26


Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component


Gene families : OG0002126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000217.26
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Aop_g60741 No alias Kleisin-like bridging component *(NSE4) of homologous... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07665.t1 Aspi01Gene07665 Kleisin-like bridging component *(NSE4) of homologous... 0.02 OrthoFinder output from all 47 species
Ceric.01G103900.1 Ceric.01G103900 Kleisin-like bridging component *(NSE4) of homologous... 0.03 OrthoFinder output from all 47 species
GSVIVT01025357001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.01 OrthoFinder output from all 47 species
LOC_Os06g41380.1 LOC_Os06g41380 Kleisin-like bridging component NSE4 of homologous... 0.01 OrthoFinder output from all 47 species
MA_10431826g0010 No alias Kleisin-like bridging component NSE4 of homologous... 0.04 OrthoFinder output from all 47 species
Mp7g13530.1 No alias Kleisin-like bridging component NSE4 of homologous... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006085 No alias Kleisin-like bridging component *(NSE4) of homologous... 0.02 OrthoFinder output from all 47 species
Solyc10g078730.2.1 Solyc10g078730 Kleisin-like bridging component NSE4 of homologous... 0.02 OrthoFinder output from all 47 species
Tin_g27049 No alias Kleisin-like bridging component *(NSE4) of homologous... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR014854 Nse4_C 206 257
No external refs found!