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  5. Cpa|evm.model.tig00000189.50

Cpa|evm.model.tig00000189.50 (SCC3, ATSCC3)


Aliases : SCC3, ATSCC3

Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component


Gene families : OG0004065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000189.50
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00122610 SCC3, ATSCC3,... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
Adi_g059337 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0315.g064312 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Cre17.g736400 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Dac_g09683 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.01 OrthoFinder output from all 47 species
Dde_g11097 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011020001 SCC3, ATSCC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Len_g23184 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Lfl_g34617 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
MA_10426289g0010 SCC3, ATSCC3 Sister-chromatid cohesion protein 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10426289g0020 SCC3, ATSCC3 component SCC3 of cohesin regulator complex 0.03 OrthoFinder output from all 47 species
MA_10426289g0030 SCC3, ATSCC3 component SCC3 of cohesin regulator complex 0.01 OrthoFinder output from all 47 species
MA_77394g0010 SCC3, ATSCC3 component SCC3 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Ore_g15148 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Pir_g10942 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015994 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.01 OrthoFinder output from all 47 species
Sam_g50912 No alias component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Solyc05g026510.4.1 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Spa_g04594 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e011344_P004 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013721 STAG 210 315
IPR032682 Cnd1_C 351 450
No external refs found!