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  5. Cpa|evm.model.tig00000157.61

Cpa|evm.model.tig00000157.61


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000157.61

Target Alias Description ECC score Gene Family Method Actions
AT3G06120 MUTE basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Als_g15692 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38670.t1 FMA, Aspi01Gene38670 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60129.t1 FMA, Aspi01Gene60129 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene62410.t1 FMA, Aspi01Gene62410 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0024.g020315 FMA bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0379.g067342 FMA not classified & original description: CDS=1-1560 0.02 OrthoFinder output from all 47 species
Ehy_g05942 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10264 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g52190.1 LOC_Os02g52190 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Len_g11887 FMA bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g43111 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47616 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01150 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 329 375
No external refs found!